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24, chemin de Borde Rouge -Auzeville - CS52627 31326 Castanet Tolosan cedex - France

Last update: May 2021

Menu Logo Principal AgroParisTech Université Paris-Saclay SAPS - Sciences Animales Paris-Saclay


GABI : Génétique Animale et Biologie IntégrativeUnité Mixte de Recherche INRA - AgroParisTech


Recent publications 

Fromain A, Van de Walle A, Cure G, Pechoux C, Serrano A, Lalatonne Y, Espinosa A, Wilhelm C. 2023. Biomineralization of magnetic nanoparticles in stem cells. Nanoscale. 

Glorion M, Pascale F, Estephan J, Huriet M, Gouin C, Urien C, Blanc F, Riviere J, Richard C, Gelin V, De Wolf J, Le Guen M, Magnan A, Roux A, Schwartz-Cornil I, Sage E . 2023. A cross-circulatory platform for monitoring innate allo-responses in lung grafts. PloS one. 

Guerin H, Quenee P, Palussiere S, Courtin P, Andre G, Pechoux C, Costache V, Mahony J, van Sinderen D, Kulakauskas S, Chapot-Chartier M-P. 2023. PBP2b Mutations Improve the Growth of Phage-Resistant Lactococcus cremoris Lacking Polysaccharide Pellicle. Applied and environmental microbiology. 

Khadhraoui N, Prola A, Vandestienne A, Blondelle J, Guillaud L, Courtin G, Bodak M, Prost B, Huet H, Wintrebert M, Pechoux C, Solgadi A, Relaix F, Tiret L, Pilot-Storck F. 2023. Hacd2 deficiency in mice leads to an early and lethal mitochondrial disease. Molecular metabolism 

Zhao H, Sene S, Mielcarek AM, Miraux S, Menguy N, Ihiawakrim D, Ersen O, Pechoux C, Guillou N, Scola J, Greneche J-M, Nouar F, Mura S, Carn F, Gazeau F, Dumas E, Serre C, Steunou N. 2023. Hierarchical superparamagnetic metal-organic framework nanovectors as anti-inflammatory nanomedicines. Journal of materials chemistry. 


Borges F, Briandet R, Callon C, Champomier-Vergès M-C, Christieans S, Chuzeville S, Denis C, Desmasures N, Desmonts M-H, Feurer C, Leroi F, Leroy S, Mounier J, Passerini D, Pilet M-F, Schlusselhuber M, Stahl V, Strub C, Talon R, Zagorec M. 2022. Contribution of omics to biopreservation: Toward food microbiome engineering Front Microbiol. 

Bouchel D. 2022. La mise en œuvre des réglementations sur l'accès aux ressources génétiques et le partage des avantages (APA) dans les centres de ressources biologiques membres de RARe. Nov'AE 

Cazals A, Estelle J, Bruneau N, Coville JL, Menanteau P, Rossignol MN, Jardet D, Bevilacqua C, Rau A, Bed'Hom B, Velge P, Calenge F. 2022. Differences in caecal microbiota composition and Salmonella carriage between experimentally infected inbred lines of chickens. Gen Sel Evol. 

Chebrout M, Kone MC, Jan HU, Cournut M, Letheule M, Fleurot R, Aguirre-Lavin T, Peynot N, Jouneau A, Beaujean N, Bonnet-Garnier A. 2022. Transcription of rRNA in early mouse embryos promotes chromatin reorganization and expression of major satellite repeats. J CELL SCIENCE. 

Conde C, Theze J, Cochard T, Rossignol MN, Fourichon C, Delafosse A, Joly A, Guatteo R, Schibler L, Bannantine JP, Biet F. 2022. Genetic Features of Mycobacterium avium subsp. paratuberculosis Strains Circulating in the West of France Deciphered by Whole-Genome Sequencing. MICROBIOLOGY SPECTRUM. 

Curcio A, van de Walle A, Pechoux C, Abou-Hassan A, Wilhelm C. 2022. In Vivo Assimilation of CuS, Iron Oxide and Iron Oxide@CuS Nanoparticles in Mice: A 6-Month Follow-Up Study. PHARMACEUTICS.

Floriot S, Bellutti L, Castille J, Moison P, Messiaen S, Passet B, Boulanger L, Boukadiri A, Tourpin S, Beauvallet C, Vilotte M, Riviere J, Pechoux C, Bertaud M, Vilotte JL, Livera G. 2022. CEP250 is Required for Maintaining Centrosome Cohesion in the Germline and Fertility in Male Mice. Front Cell Dev. 

Leduc A, Le Guillou S, Bianchi L, Oliveira Correia L, Gelé M, J. Pires J, Martin P, Leroux C, Le Provost F, Boutinaud M. 2022. Milk proteins as a feed restriction signature indicating the metabolic adaptation of dairy cows. Scientific report. 

Marin M, Rizzotto F, Leguillier V, Pechoux C, Borezee-Durant E, Vidic J. 2022. Naked-eye detection of Staphylococcus aureus in powdered milk and infant formula using gold nanoparticles. JOURNAL OF MICROBIOLOGICAL METHODS

Marthey S, Delavaud A, Marthey N, Méal C, Tixier-Boichard M. 2022. Présentation du portail d'accès aux ressources biologiques du pilier animal de RARe. Nov'AE 

Martignon M, Bergheaud V, Buff S, Chuat V, Cottin R, Goussopoulos J, Jardet D, Tixier-Boichard M, Valence F. 2022. Déploiement de Systèmes de Management de la Qualité dans les Centres de Ressources Biologiques de l’Infrastructure de Recherche RARe. Nov'AE 

Pereira G, Guo YZ, Silva E, Bevilacqua C, Charpigny G, Lopes-da-Costa L, Humblot P. 2022. Progesterone differentially affects the transcriptomic profiles of cow endometrial cell types. BMC Genomics. 

Pereira G, Guo YZ, Silva E, Silva MF, Bevilacqua C, Charpigny G, Lopes-da-Costa L, Humblot P. 2022. Subclinical endometritis differentially affects the transcriptomic profiles of endometrial glandular, luminal, and stromal cells of postpartum dairy cows. J. Dairy Sci 

Rejasse A, Waeytens J, Deniset-Besseau A, Crapart N, Nielsen-Leroux C, Sandt C. 2022. Plastic biodegradation: Do Galleria mellonella Larvae Bioassimilate Polyethylene? A Spectral Histology Approach Using Isotopic Labeling and Infrared Microspectroscopy Env Sci Tech. 


Borey M, Blanc F, Lemonnier G, Leplat JJ, Jardet D, Rossignol MN, Ravon L, Billon Y, Bernard M, Estelle J, Rogel-Gaillard C. 2021. Links between fecal microbiota and the response to vaccination against influenza A virus in pigs. NPJ Vaccines, 6

Castille J, Passet B, Makhzami S, Vilotte M, Moazami-Goudarzi K, Truchet S, Daniel-Carlier N, Gaillard AL, Andréoletti O, Vaiman D, Beauvallet C, Vaiman A, Floriot S, Calvel P, Mouillet-Richard S, Duchesne A, Béringue V, Vilotte JL. 2021. Co-invalidation of Prnp and Sprn in FVB/N mice affects reproductive performances and highlight complex biological relationship between PrP and Shadoo. Biochem Biophys Res Commun. 551.

Chankeaw W, Lignier S, Richard C, Ntallaris T, Raliou M, Guo YZ, Plassard D, Bevilacqua C, Sandra O, Andersson G, Humblot P, Charpigny G. 2021 . Analysis of the transcriptome of bovine endometrial cells isolated by laser micro-dissection (1): specific signatures of stromal, glandular and luminal epithelial cells. BMC Genomics. 22

Chankeaw W, Lignier S, Richard C, Ntallaris T, Raliou M, Guo YZ, Plassard D, Bevilacqua C, Sandra O, Andersson G, Humblot P, Charpigny G. 2021. Analysis of the transcriptome of bovine endometrial cells isolated by laser micro-dissection (2): impacts of post-partum negative energy balance on stromal, glandular and luminal epithelial cells. BMC Genomics. 22

Conde C, Branger M, Cochard T, Rossignol MN, Fourichon C, Delafosse A, Davergne A, Joly A, Ngwa-Mbot D, Journaux L, Guatteo R, Schibler L, Biet F. 2021. Draft Genome Sequences of 142 Mycobacterium avium subsp. paratuberculosis Strains Isolated from Naturally Infected Dairy Cattle. MICROBIOLOGY RESOURCE ANNOUNCEMENTS. 10, e00697-21 

Consentino L, Rejasse A, Crapart N, Bevilacqua C, Nielsen-LeRoux C. 2021. Laser capture microdissection to study Bacillus cereus iron homeostasis gene expression during Galleria mellonella in vivo gut colonization. Virulence. 12, 2104-2121

Crisci E, Moroldo M, Manh TPV, Mohammad A, Jourdren L, Urien C, Bouguyon E, Bordet E,  Bevilacqua C, Bourge M, Pezant J, Pleau A,  Boulesteix O, SchwartzI I, Bertho N, Giuffra E. 2020. Distinctive cellular and metabolic reprogramming in porcine lung mononuclear phagocytes infected with type 1 PRRSV strains. Front Immunol. 11, 588411

Hurtaud C, Chaabouni R, Resmond R, Miranda G, Graulet B, Morinière C. 2021. Caractérisation du lait de deux races locales de vaches: la Bretonne Pie Noir et la Froment du Léon. INRAE Prod Anim. 34, 29- 46. 

Mach N, Moroldo M, Rau A, Lecardonnel J, Le Moyec L, Robert C, Barrey E. 2021. Understanding the Holobiont: Crosstalk Between Gut Microbiota and Mitochondria During Long Exercise in Horse. Front. Mol. Biosci.  8, 656204 

Le Ribeuz H, To L, Ghigna MR, Martin C, Nagaraj C, Dreano E, Rucker-Martin C, Girerd B, Bouligand JM, Pechoux C, Lambert M, Boet A, Issard J, Mercier O, Hoetzenecker K, Manoury B, Becq F, Burgel PR, Cottart CH, Olschewski A, Sermet-Gaudelus I, Perros F, Humbert M, Montani D, Antigny F. 2021. Involvement of CFTR in the pathogenesis of pulmonary arterial hypertension. EUROPEAN RESPIRATORY JOURNAL, 58 

Lu J, Le Hir R, Gomez-Paez D-M, Coen O, Pechoux C, Jasinski S, Magnani E. 2021. The nucellus: between cell elimination and sugar transport. Plant Physiol. 185, 478-490

Sellem E, Marthey S, Rau A, Jouneau L, Bonnet A, Le Danvic C, Guyonnet B, Kiefer H, Jammes H, Schibler L. 2021. Dynamics of cattle sperm sncRNAs during maturation, from testis to ejaculated sperm. Epig Chrom, 14

Tixier-Boichard M, Fabre S, Dhorne-Pollet S, Goubil A, Acloque H, Vincent-Naulleau S, Ross P, Wang Y, Chanthavixay G, Cheng H, Ernst C, Leesburg V, Giuffra E, Zhou H, the Collaborative Working Group.  2021. Tissue Resources for the Functional Annotation of Animal Genomes. Front Genet. 12


Coen O, Lu J, Xu WJ, Pateyron S, Grain D, Péchoux C, Lepiniec L, Magnani E. 2020. A TRANSPARENT TESTA transcriptional module regulates endothelium polarity. Front Plant Sci. 10, 1801

Curcio A, Van de Walle A, Serrano A, Preveral S, Péchoux C, Pignol D, Menguy N, Lefevre CT, Espinosa A, Wilhelm C. 2020. Transformation cycle of magnetosomes in human stem cells: From degradation to biosynthesis of magnetic nanoparticles anew. ACS Nano. 14, 1406-1417

Hadadi E,Taylor W, Li X, Aslan Y, Villote M, Rivière J, Duvallet G, Auriau C, Dulong S, Raymond Letron I, Provot S, Bennaceur-Griscelliand AL, Acloque H. 2020. Chronic circadian disruption modulates breast cancer stemness and immune microenvironment to drive metastasis in mice. Nat Commun. 11, 3193

Lezmi G, Vibhushan S, Bevilaqua C, Crapart N, Cagnard N, Khen-Dunlop N, Boyle-Freyssaut C, Hadchouel A, Delacourt C. 2020. Congenital cystic adenomatoid malformations of the lung: an epithelial transcriptomic approach. Respir Res. 21, 43

Li X, Porcino M, Martineau-Corcos C, Guo T, Xiong T, Zhu WF, Patriarche G, Pechoux C, Perronne B, Hassan A, Kummerle R, Michelet A, Zehnacker-Rentien A, Zhang JW, Gref R. 2020. Efficient incorporation and protection of lansoprazole in cyclodextrin metal-organic frameworks. Int J Pharm. 585, 119442

Marthey S, Estellé J, Blin A, Wahlberg P, Créchet1 F, Lecardonnel J, Tessiot F, Rogel‑Gaillard C,  Bourneuf E. 2020. Transcription from a gene desert in a melanoma porcine model. Mol Genet Genomics, 295, 1239-1252

Massacci FR, Tofani S, Forte C, Bertocchi M, Lovito C, Orsini S, Tentellini M, Marchi L, Lemonnier G, Luise D, Blanc F, Castinel A Bevilacqua C, Rogel-Gaillard C, Pezzotti G, Estellé J, Trevisi P2, Magistrali CF. 2020. Host genotype and amoxicillin administration affect the incidence of diarrhoea and faecal microbiota of weaned piglets during a natural multiresistant ETEC infection. J Anim Breed Genet. 137, 60-72

Munyaka PM, Blanc F, Estellé-Fabrellas J, Lemonnier G, Leplat JJ, Rossignol MN, Jardet D, Plastow G, Billon Y, Willing   BP, Rogel-Gaillard C. 2020. Discovery of predictors of Mycoplasma hyopneumoniae vaccine response efficiency in pigs: 16S rRNA gene fecal microbiota analysis. Microorganisms, 8- 1151

Nicolas‐Boluda A, Yang Z, Dobryden I, Carn F, Winckelmans N, Péchoux C, Bonville P, Bals S,  Claesson PM, Gazeau F, Pileni MP. 2020. Intracellular fate of hydrophobic nanocrystal self‐assemblies in tumor cells. Adv Funct Mater. 30, 2004274

Pawlowski K, Lago‑Novais D, Bevilacqua C, Mobuchon L, Crapart N, Faulconnier Y, Boby C, Carvalho G, Martin P, Leroux C. 2020. Different miRNA contents between mammary epithelial cells and milk fat globules: a random or a targeted process? Mol Biol Rep. 47, 8259-8264

Randazzo P Anba-Mondoloni J, Aubert-Frambourg A, Guillot A, Pechoux C, Vidic J, Auger S. 2020. Bacillus subtilis egulators MntR and Zur participate in redox cycling, antibiotic sensitivity, and cell wall plasticity. J Bacteriol. 202, e00547-19

Sabine Riffault, Sara Hägglund, Efrain Guzman, Katarina Näslund, Luc Jouneau, Catherine Dubuquoy, Vincent Pietralunga, Daphné Laubreton, Olivier Boulesteix, David Gauthier, Aude Remot , Abdelhak Boukaridi, Alexander Falk, Ganna Shevchenko, Sara Bergström Lind, Karin Vargmar, Baoshan Zhang, Peter D. Kwong, María Jose Rodriguez, Marga Garcia Duran, Isabelle Schwartz-Cornil, Jean-François Eléouët, Geraldine Taylor, Jean François Valarcher. 2020. A single shot pre-fusion-stabilized bovine RSV F vaccine is safe and effective in newborn calves with maternally derived antibodies. Vaccines. 8, 231

Sellem E, Marthey S, Rau A, Jouneau L, Bonnet A, Perrier JP, Fritz S, Le Danvic C, Boussaha M, Kiefer H, Jammes H, Schibler L. 2020. A comprehensive overview of bull sperm‑borne small non‑coding RNAs and their diversity across breeds. Epigenetics Chromatin, 13-19


Auger S, Henry C, Pechoux C, Lejal N, Zanet V, Nikolic MV, Manzano M, Vidic J. 2019. Exploring the impact of Mg-doped ZnO nanoparticles on a model soil microorganism Bacillus subtilis. Ecotoxicol Environ Saf. 182, UNSP 109421

Coen O, Lu J, Xu WJ, De Vos D, Pechoux C, Domergue F, Grain D, Lepiniec L, Magnani E. 2019. Deposition of a cutin apoplastic barrier separating seed maternal and zygotic tissues. BMC Plant Biol. 19.

Escouflaire E, Rebours E, Charles M, Orellana S, Cano M, Rivière J, Grohs C, Hayes H, Capitan A. 2019. Α de novo 3.8-Mb inversion affecting the EDA and XIST genes in a heterozygous female calf with generalized hypohidrotic ectodermal dysplasia. BMC Genomics. 20, 715

Helary L, Castille J, Passet B, Vaiman A, Beauvallet C, Jaffrezic F, Charles M, Tamzini M, Baraige F, Letheule M, Laubier J, Moazami-Goudarzi K, Vilotte JL, Blanquet V, Duchesne A. DNAJC2 is required for mouse early embryonic development. Biochem Biophys Res Commun. 516, 258-263

Hue-Beauvais C, Aujean E, Miranda G, Ralliard-Rousseau D, Valentino S, Brun N, Ladebese S, Pechoux C, Chavatte-Palmer P, Charlier M. 2019. Impact of exposure to diesel exhaust during pregnancy on mammary gland development and milk composition in the rabbit. PLoS One, 14-e0212132

Lambert M, Capuano V, Boet A, Tesson L, Bertero T, Nakhleh MK, Remy S, Anegon I, Pechoux C, Hautefort A, Rucker-Martin C, Manoury B, Domergue V, Mercier O, Girerd B, Montani D, Perros F, Humbert M, Antigny F. 2019. Characterization of Kcnk3-mutated rat, a novel model of pulmonary hypertension. Circ Res. 125, 678-695

Le Guillou S, Laubier J, Pechoux C, Aujean E, Castille J, Leroux C, Le Provost F. 2019. Defects of the endoplasmic reticulum and changes to lipid droplet size in mammary epithelial cells due to miR-30b-5p overexpression are correlated to a reduction in Atlastin 2 expression. Biochem Biophys Res Commun. 512, 283-288

Li JY, Bed'hom B, Marthey S, Valade M, Dureux A, Moroldo M, Pechoux C, Coville JL, Gourichon D, Vieaud A, Dorshorst B, Andersson L, Tixier-Boichard M. 2019. A missense mutation in TYRP1 causes the chocolate plumage color in chicken and alters melanosome structure. Pigment Cell Melanoma Res. 32, 381-392018

Piquereau J, Boet A, Péchoux C, Antigny F, Lambert M, Gressette M, Ranchoux B, Gambaryan N, Domergue V, Mumby S, Montani D, Adcock IM, Humbert M, Garnier A, Rucker-Martin C, Perros F. 2019. The BET bromodomain inhibitor I-BET-151 induces structural and functional alterations of the heart mitochondria in healthy male mice and rats. Int J Mol Sci. 27, pii: E1527

Rousseau-Ralliard D, Valentino SA, Aubrière MC, Dahirel M, Lallemand MS, Archilla C, Jouneau L, Fournier N, Richard C, Aioun J, Vitorino Carvalho A, Lecardonel J, Slama R, Duranthon V, Cassee FR, Chavatte-Palmer P, Couturier-Tarrade A. 2019. Effects of first-generation in utero exposure to diesel engine exhaust on second-generation placental function, fatty acid profiles and foetal metabolism in rabbits: preliminary results. Sci Rep. 9, 9710

Skerniskyte J, Krasauskas R, Pechoux C, Kulakauskas S, Armalyte J, Suziedeliene E. 2019. Surface-Related Features and Virulence Among Acinetobacter baumannii Clinical Isolates Belonging to International Clones I and II. Front Microbiol. 9, 3116

Theodorou I, Courtin P, Palussière S, Kulakauskas S,Bidnenko E, Péchoux C, Fenaille F, Penno C, Mahony J, van Sinderen D, Chapot-Chartier MP. 2019. A dual-chain assembly pathway generates the high structural diversity of cell-wall polysaccharides in Lactococcus lactis. J Biol Chem. 294, 17612- 17625


Auger S, Henry C, Pechoux C, Suman S, Lejal N, Bertho N, Larcher T, Stankic S, Vidic J. 2018. Exploring multiple effects of Zn0.15Mg0.85O nanoparticles on Bacillus subtilis and macrophages. Sci Rep. 8, 12276

Bevilacqua C, Ducos B. 2018. Laser microdissection: A powerful tool for genomics at cell level. Mol Aspects Med. 59, 5-27.

Coyral-Castel S, Ramé C, Cognié J, Lecardonnel J, Marthey S, Esquerré D, Hennequet-Antier C, Eli S, Fritz S, Boussaha M, Jaffrézic F, Dupont J. 2018. KIRREL is differentially expressed in adipose tissue from 'fertil plus ' and 'fertil-' cows: in vitro role in ovary? Reproduction. 155, 183-198.

Espinosa A, Curcio A, Cabana S, Radtke G, Bugnet M, Kolosnjaj-Tabi J, Pechoux C, Alvarez-Lorenzo C, Botton GA, Silva AKA, Abou-Hassan A, Wilhelm C. 2018. Intracellular biodegradation of Ag nanoparticles, storage in ferritin, and protection by a Au Shell for enhanced photothermal therapy. ACS NANO. 12, 6523-6535

Lee C, Moroldo M, Perdomo-Sabogal A, Mach N, Marthey S, Lecardonnel J, Wahlberg P, Chong AY, Estellé J, Ho SYW, Rogel-Gaillard C, Gongora J. 2018. Inferring the evolution of the major histocompatibility complex of wild pigs and peccaries using hybridisation DNA capture-based sequencing. Immunogenetics. 70, 401-417.

Maroilley T, Berri M, Lemonnier G, Esquerré D, Chevaleyre C, Mélo S, Meurens F, Coville JL, Leplat JJ, Rau A,  Bed’hom B, Vincent-Naulleau S, Mercat MJ, Billon Y, Lepage P, Rogel-Gaillard C, Estellé J. 2018. Immunome differences between porcine ileal and jejunal Peyer’s patches revealed by global transcriptome sequencing of gut-associated lymphoid tissues. Sci Rep, 8-907


Beauclercq S, Hennequet-Antier C, Praud C, Godet E, Collin A, Tesseraud S, Métayer-Coustard S, Bourin M, Moroldo M, Martins F, Lagarrigue S, Bihan-Duval EL, Berri C. 2017. Muscle transcriptome analysis reveals molecular pathways and biomarkers involved in extreme ultimate pH and meat defect occurrence in chicken. Sci Rep. 7, 6447.

Bevilacqua C, Ducos B. 2017. Laser microdissection: A powerful tool for genomics at cell level. Mol Aspects Med.

Bourneuf E, Otz P, Pausch H, Jagannathan V, Michot P,  Grohs C, Piton G, Ammermüller S, Deloche MC, Fritz S, Leclerc H, Péchoux C, Boukadiri A, Hozé C, Saintilan R, Créchet F,  Mosca M, Segelke D, Guillaume F, Bouet S, Baur A, Vasilescu A, Genestout L, Thomas A, Allais-Bonnet A, Rocha D, Colle MA, Klopp C,  Esquerré D, Wurmser C, Flisikowski K, Schwarzenbacher H, Burgstaller  J, Brügmann M, Dietschi E, Rudolph N, Fayolle G, Danchin-Burge C,  Schibler L, Bed’Hom B, Hayes BJ, Daetwyler HD, Fries R, Boichard  D, Pin D, Drögemüller C, Capitan A.  2017. Rapid discovery of de novo deleterious mutations in cattle enhances the value of livestock as model specie. Sci Rep. 7, 11466.

Caillot N, Bouley J, Jain M, Mariano S, Luce S, Horiot S, Airouche S, Beuraud C, Beauvallet C, Devillier P, Chollet-Martin S, Kellenberger,  C, Mascarell L, Chabre H, Batard T, Nony E, Lombardi V, Baron-Bodo V, Moingeon P. 2017. Sialylated Fetuin-A as a candidate predictive biomarker for successful grass pollen allergen immunotherapy. J Allergy Clin Immunol. 140, 759-770.

Coen O, Fiume E, Xu W, De Vos D, Lu J, Pechoux C, Lepiniec L, Magnani E. 2017. Developmental patterning of the sub-epidermal integument cell layer in Arabidopsis seeds. Development. 144, 1490-1497.

Duchesne A, Vaiman A, Castille J, Beauvallet C, Gaignard P, Floriot S, Rodriguez S, Vilotte M, Boulanger L, Passet B, Albaric O, Guillaume F, Boukadiri A, Richard L, Bertaud M, Timsit E, Guatteo R, Jaffrézic F, Calvel P, Helary L, Mahla R, Esquerré D, Péchoux C, Liuu S, Vallat JM, Boichard D, Slama A, Vilotte JL. 2017. Bovine and murine models highlight novel roles for SLC25A46 in mitochondrial dynamics and metabolism, with implications for human and animal health. PLoS Genet. 13, e1006597

Elis S, Oseikria M, Vitorino Carvalho A, Bertevello PS, Corbin E, Teixeira Gomes AP, Lecardonnel J, Archilla C, Duranthon V, Labas V, Uzbekova S. 2017. Docosahexaenoic acid mechanisms of action on the bovine oocyte-cumulus complex. J Ovarian Res. 10, 74

Gaillard V, Galloux M, Garcin D, Eléouët JF, Le Goffic R, Larcher T, Rameix-Welti MA, Boukadiri A, Héritier J, Segura JM, Baechler E, Arrell M, Mottet-Osman G, Nyanguile O. 2017. A short double-stapled peptide inhibits respiratory syncytial virus entry and spreading. Antimicrob Agents Chemother. 61. pii: e02241-16

Kortebi M, Milohanic E, Mitchell G, Péchoux C, Prevost MC, Cossart P, Bierne H. 2017. Listeria monocytogenes switches from dissemination to persistence by adopting a vacuolar lifestyle in epithelial cell. PLoS Pathog. 13, e1006734

Latrasse D, Rodriguez Granados N, Veluchamy A, Mariappan, Bevilacqua C, Crapart N, Camps C, Sommard V, Raynaud C, Dogimon C, Boualem A, Benhamed M, Bendahmane A. 2017. The quest for epigenetic regulation underlying unisexual flower development in Cucumis melo. Epigenetics Chromatin. 10, 22.

Li N, Richoux R, Leconte N, Bevilacqua C, Maillard MB, Parayre S, Aubert-Frogerais L, Warlouzel J, Moya Leclair E, Denis C, Martin P, Gagnaire V. 2017Somatic cell recovery by microfiltration technologies: a novel strategy to study the actual impact of somatic cells on cheese matrix. Int Dairy J. 65, 5-13

Mach N, Ramayo-Caldas Y,A17:J18 Clark A, Moroldo M, Robert C, Barrey E, Lopez JM, Le Moyec L. 2017. Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses. BMC Genomics. 18, 187

Mach N, Foury A, Kittelmann S, Reigner F, Moroldo M, Ballester M, Esquerré D, Rivière J, Sallé G, Gérard P, Moisan MP, Lansade L. 2017. The effects of weaning methods on gut microbiota composition and horse physiology. Front Physiol. 8, 835.

Meyer L, Leymarie O, Chevalier C, Esnault E, Moroldo M, Da Costa B, Georgeault S, Roingeard P, Delmas B, Quéré P, Le Goffic R. 2017. Transcriptomic profiling of a chicken lung epithelial cell line (CLEC213) reveals a mitochondrial respiratory chain activity boost during influenza virus infection. PLoS One. 12, e0176355.

Remot A, Descamps D, Noordine M, Boukadiri A, Mathieu E, Robert V, Riffault S, Lambrecht B, Langella P, Hammad H, Thomas M. 2017Bacteria isolated from lung modulate asthma susceptibility in mice. ISME J. 1, 14

Roy J, Tardieu F, Tixier-Boichard M, Schurr U. 2017. European infrastructures for sustainable agriculture. Nat Plants. 3, 756-758

Sadovskaya I, Vinogradov E, Courtin P, Armalyte J, Meyrand M, Giaouris E, Palussiere S, Furlan S, Pechoux C, Ainsworth S, Mahony J, van Sinderen D,  Kulakauskas S, Guerardel Y, Chapot-Chartier MP. 2017.  Another Brick in the Wall: a Rhamnan Polysaccharide Trapped inside Peptidoglycan of Lactococcus lactis. mBio. 8, e01303-17.

Sanz G, Leray I, Muscat A, Acquistapace A, Cui T, Rivière J, Vincent Naulleau S, Giandomenico V, Mir LM. 2017. Gallein, a Gβγ subunit signalling inhibitor, inhibits metastatic spread of tumour cells expressing OR51E2 and exposed to its odorant ligand. BMC Res Notes. 10, 541

Sanz G, Leray I, Grébert D, Antoine S, Acquistapace A, Muscat A, Boukadiri A, Mir LM. 2017. Structurally related odorant ligands of the olfactory receptor OR51E2 differentially promote metastasis emergence and tumor growth. Oncotarget. 8, 4330-4341.

Tapponnier Y, Afanassieff M, Aksoy I, Aubry M, Moulin A, Medjani ., Bouchereau W, Mayère C, Osteil P, Nurse-Francis J, Oikonomakos I, Joly T, Jouneau L, Archilla C, Schmaltz-Panneau B, Peynot N, Barasc H, Pinton A, Lecardonnel J, Gocza E, Beaujean N, Duranthon V, Savatier P. 2017. Reprogramming of rabbit induced pluripotent stem cells toward epiblast and chimeric competency using Krüppel-like factors. Stem Cell Res. 24, 106-117.

Vitorino Carvalho A, Canon E, Jouneau L, Archilla C, Laffont L, Moroldo M, Ruffini S, Corbin E, Mermillod P, Duranthon V. 2017. Influence of co-culture on the transcriptome of bovine in vitro produced embryos: minor impact of feeder cell origin. Reproduction. 154, 695-710.


Antigny F, Hautefort A, Meloche J, Belacel-Ouari M, Manoury B, Rucker-Martin C, Longin C, Potus F, Nadeau V, Tremblay E, Ruffenach G, Bourgeois A, Dorfmueller P, Breuils-Bonnet,S, Fadel E, Ranchoux B, Jourdon P, Girerd B, Montani D, Provencher S, Bonnet S, Simonneau G, Humbert M, Perros F. 2016. Potassium channel subfamily K member 3 (KCNK3) contributes to the development of pulmonary arterial hypertension. Circulation. 133, 1371-1385

Biacchesi S, Jouvion G, Mérour E, Boukadiri A, Desdouits M, Ozden S, Huerre M, Ceccaldi PE, Brémont M. 2016. Rainbow trout (Oncorhynchus mykiss) muscle satellite cells are targets of salmonid alphavirus infection. Vet Res. 47, 9

Espinosa A, Silva AK, Sánchez-Iglesias A, Grzelczak M, Péchoux C, Desboeufs K, Liz-Marzán LM, Wilhelm C. 2016. Cancer cell internalization of gold nanostars impacts their photothermal efficiency in vitro and in vivo: toward a plasmonic thermal fingerprint in tumoral environment. Adv Healthc Mater. 5, 1040-1048

Hervé PL, Descamps D, Deloizy C, Dhelft V, Laubreton D, Bouguyon E, Boukadiri A, Dubuquoy C, Larcher T, Benhamou PH, Eléouët JF, Bertho N, Mondoulet L, Riffault S. 2016. Non-invasive epicutaneous vaccine against Respiratory Syncytial Virus: Preclinical proof of concept. J Control Release. 243, 146-159

Hoffmann TW, Pham HP, Bridonneau C, Aubry C, Lamas B, Martin-Gallausiaux C, Moroldo M, Rainteau D, Lapaque N, Six A, Richard ML, Fargier E, Le Guern ME, Langella P, Sokol H. 2016. Microorganisms linked to inflammatory bowel disease-associated dysbiosis differentially impact host physiology in gnotobiotic mice. ISME Journal. 10, 460-477

Honvo-Houéto E, Henry C, Chat S, Layani S, Truchet S. 2016. The endoplasmic reticulum and casein-containing vesicles contribute to milk fat globule membrane. Mol Biol Cell. 27, 2946-2964

Llopis M, Cassard AM, Wrzosek L, Boschat L, Bruneau A, Ferrere G, Puchois V, Martin JC, Lepage P, Le roy T, Lefevre L, Langelier B, Cailleux F, González-Castro A M., Rabot S, Gaudin F, Agostini H, Prévot S, Berrebi D, Ciocan D, Jousse C, Naveau S, Gérard P, Perlemuter G. 2016. Intestinal microbiota contributes to individual susceptibility to alcoholic liver disease. Gut. 65, 830-839

Loyau T, Hennequet-Antier C, Coustham V, Berri C, Leduc M, Crochet S, Sannier M, Duclos MJ, Mignon-Grasteau S, Tesseraud S, Brionne A, Metayer-Coustard S, Moroldo M, Lecardonnel J, Martin P, Lagarrigue S, Yahav S, Collin A. 2016. Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge. BMC Genomics. 17, 329

Montazer-Torbati F, Boutinaud M, Brun N, Richard C, Neveu A, Jaffrézic F, Laloë D, LeBourhis D, Nguyen M, Chadi S, Jammes H, Renard JP, Chat S, Boukadiri A, Devinoy E. 2016. Differences during the first lactation between cows cloned by somatic cell nuclear transfer and non-cloned cows. J Dairy Sci. 99, 4778-4794 

Michot P, Chahory S, Marete A, Grohs C, Dagios D, Donzel E, Aboukadiri A, Deloche MC, Allais-Bonnet A, Chambrial M, Barbey S, Genestout L, Boussaha M, Danchin-Burge C, Fritz S, Boichard D, Capitan A. 2016. A reverse genetic approach identifies an ancestral frameshift mutation in RP1 causing recessive progressive retinal degeneration in European cattle breeds. Genet Sel Evol. 48-56

Osteil P, Moulin A, Santamaria C, Joly T, Jouneau L, Aubry M, Tapponnier Y, Archilla C, Schmaltz-Panneau B, Lecardonnel J, Barasc H, Mouney-Bonnet N, Genthon C, Roulet A, Donnadieu C, Acloque H, Gocza E.... 2016. A panel of embryonic stem cell lines reveals the variety and dynamic of pluripotent states in rabbits. Stem Cell Rep. 7, 383-398

Remot A, Descamp D, Jouneau L, Laubreto D, Dubuquoy C, Bouet S, Lecardonnel J, Rebours E, Petit Camurdan A, Riffault S. 2016. Flt3 ligand improves the innate response to respiratory syncytial virus and limits lung disease upon RSV reexposure in neonate mice. Eur J Immunol. 46, 874-884

Solopova A, Formosa-Dague C, Courtin P, Furlan S, Veiga P, Pechoux C, Armalyte J, Sadauskas M, Kok J, Hols P, Dufrene YF, Kuipers OP, Chapot-Chartier MP, Kulakauskas S. 2016. Regulation of cell wall plasticity by nucleotide metabolism in Lactococcus lactis. J Biol Chem. 291, 11323-11336v

Vidic J, Richard CA, Pechoux-Longin C, Da Costa B, Bertho N, Mazerat S, Delmas B, Chevalier C. 2016. Amyloid assemblies of influenza a virus PB1-F2 protein Damage membrane and induce cytotoxicity. J Biol Chem. 291, 739-751

Xu WJ, Fiume E, Coen O, Pechoux C, Lepiniec L, Magnani E. 2016. Endosperm and nucellus develop antagonistically in Arabidopsis seeds. Plant Cell. 28, 1343-1360 PF


Leif Andersson, Alan L Archibald, Cynthia D Bottema, Rudiger Brauning, Shane C Burgess, Dave W Burt, Eduardo Casas, Hans H Cheng, Laura Clarke, Christine Couldrey, Brian P Dalrymple, Christine G Elsik, Sylvain Foissac, Elisabetta Giuffra, Martien A Groenen, Ben J Hayes, LuSheng S Huang, Hassan Khatib, James W Kijas, Heebal Kim, Joan K Lunney, Fiona M McCarthy, John C McEwan, Stephen Moore, Bindu Nanduri, Cedric Notredame, Yniv Palti, Graham S Plastow, James M Reecy, Gary A Rohrer, Elena Sarropoulou, Carl J Schmidt, Jeffrey Silverstein, Ross L Tellam, Michele Tixier-Boichard, Gwenola Tosser-Klopp, Christopher K Tuggle, Johanna Vilkki, Stephen N White, Shuhong Zhao, Huaijun Zhou and The FAANG Consortium Coordinated international action to accelerate genome-to-phenome with FAAG. 2015. The Functional Annotation of ANimal Genomes project. Genome Biol, 16-57

Baco M., Chu C-Y, Bouet S., Rogel-Gaillard C., Bourneuf E., Le Provost F., Chu C-Y, Vincent-Naulleau S. 2014. Analysis of melanoma-related microRNAs expression during the spontaneous regression of cutaneous melanomas in MeLiM pigs. Pig Cell Melanoma Res. 27, 668-670

Chaussé AM, Grépinet O, Bottreau E, Robert V, Hennequet-Antier C, Lalmanach AC, Lecardonnel J, Beaumont C, Velge P. 2014. Susceptibility to Salmonella carrier-state: a possible Th2 response in susceptible chicks. Vet Immunol Immunopathol . 159, 16-28

Desjardin C, Chat S, Gilles M, Legendre R, Riviere J, Mata X, Balliau T, Esquerré D, Cribiu EP, Betch JM, Schibler L. 2014. Involvement of mitochondrial dysfunction and ER-stress in the physiopathology of equine osteochondritis dissecans (OCD). Exp Mol Pathol. 96, 328-338

Halliez S, Martin-Lanneree S, Passet B, Hernandez-Rapp J, Castille J, Urien C, Chat S, Laude H, Vilotte JL, Mouillet-Richard S, Beringue V. 2015. Prion protein localizes at the ciliary base during neural and cardiovascular development, and its depletion affects α-tubulin post-translational modifications. Sci Rep. 5, 17146

Jacquier V, Estellé J, Schmaltz-Panneau B, Lecardonnel J, Moroldo M, Lemonnier G, Turner-Maier J, Duranthon V, Oswald IP, Gidenne T, Rogel-Gaillard C. 2015. Genome-wide immunity studies in the rabbit: transcriptome variations in peripheral blood mononuclear cells after in vitro stimulation by LPS or PMA-ionomycin. BMC Genomics. 16, 26

Le Guillou S, Marthey S, Laloë D, Laubier J, Domagalski J, Mobuchon L, Leroux C, Le Provost F. 2014. Identification and comparison of lactating mouse and bovine mammary gland miRNomes. Plos One. 9, e91938

Leymarie O, Embury-Hyatt C, Chevalier C, Jouneau L, Moroldo M, Da Costa B, Berhane Y, Delmas B, Weingartl HM, Le Goffic R. 2014. PB1-F2 attenuates virulence of highly pathogenic avian H5N1 influenza virus in chickens. PLoS ONE. 9, e100679

Mobuchon L, Marthey S, Boussaha M, Le Guillou S, Leroux C, Le Provost F. 2015. Annotation of the goat genome using next generation sequencing of microRNA expressed by the lactating mammary gland: comparison of three approaches. BMC Genomics. 16, 285

Mobuchon L, Marthey S, Le Guillou S, Laloë D, Le Provost F, Leroux C. 2015. Food deprivation affects the miRNome in the lactating goat mammary gGland. PLoS One. 10, e0140111

Ranchoux B, Antigny F, Rucker-Martin C, Hautefort A, Péchoux C, Bogaard HJ, Dorfmüller P, Remy S,  Lecerf F, Planté S, Chat S, Fadel E, Houssaini A, Anegon I, Adnot S,  Simonneau G, Humbert M, Cohen-Kaminsky S, Perros F. 2015. Endothelial-to-Mesenchymal Transition in Pulmonary Hypertension. Circulation. 131, 1006-1018

Roux PF, Marthey S, Djari A, Moroldo M, Esquerré D, Estellé J, Klopp C, Lagarrigue S, Demeure O. 2015. Comparison of whole-genome (13X) and capture (87X) resequencing methods for SNP and genotype callings. Anim Genet. 46, 82-86

Saenz-de-Juano MD, Marco-Jimenez F, Schmaltz-Panneau B, Jimenez-Trigos E, Viudes-de-Castro MP, Peñaranda DS, Jouneau L, Lecardonnel J, Lavara R, Naturil-Alfonso C, Duranthon V, Vicente JS. 2014. Vitrification alters rabbit foetal placenta at transcriptomic and proteomic level. Reproduction. 147, 789-801

Sanz G, Leray I, Dewaele A, Sobilo J, Lerondel S, Bouet S, Grébert D, Monnerie R, Pajot-Augy E, Mir LM. 2014. Promotion of cancer cell invasiveness and metastasis emergence caused by olfactory receptor stimulation. PLoS ONE. 9, e85110

Schmaltz-Panneau B, Jouneau L, Osteil P, Tapponnier Y, Afanassieff M, Moroldo M, Jouneau A, Daniel N, Archilla C, Savatier P, Duranthon V. 2014. Contrasting transcriptome landscapes of rabbit pluripotent stem cells in vitro and in vivo. Anim Reprod Sci. 149, 67-79

Theze B, Bernards N, Beynel A., Bouet S, Kuhnast B, Buvat I, Tavitian B, Boisgard R. 2015. Monitoring therapeutic efficacy of sunitinib using [(18)F]FDG and [(18)F]FMISO PET in an immunocompetent model of luminal B (HER2-positive)-type mammary carcinoma. BMC Cancer. 15, 534

Thomas M, Wrzosek L, Miquel S, Noordine ML, Bouet S, Chevalier-Curt MJ, Robert V, Philippe C, Bridonneau C, Cherbuy C, Robbe-Masselot C, Langella P. 2013. Bacteroides Thetaiotaomicron and Faecalibacterium prausnitzii Shape the Mucus Production and Mucin O-Glycosylation in Colon Epithelium. Gastroenterology. 144, S59

Tomas J, Reygner J, Mayeur C, Ducroc R, Bouet S, Bridonneau C, Cavin JB, Thomas M, Langella P, Cherbuy C. 2015. Early colonizing Escherichia coli elicits remodeling of rat colonic epithelium shifting toward a new homeostatic state. ISME J. 9, 46-58

Vu Manh TP, Elhmouzi-Younes J, Urien C, Ruscanu S, Jouneau L, Bourge M, Moroldo M, Foucras G, Salmon H, Marty H, Quéré P, Bertho N, Boudinot P, Dalod M, Schwartz-Cornil I. 2015. Defining mononuclear phagocyte subset homology across several distant warm-blooded vertebrates through comparative transcriptomics. Front Immunol. 6, 299

Wrzosek L, Miquel S, Noordine ML, Bouet S, Chevalier-Curt MJ, Robert V, Philippe C, Bridonneau C, Cherbuy C, Robbe-Masselot C, Langella P, Thomas M. 2013. Bacteroides thetaiotaomicron and Faecalibacterium prausnitzii influence the production of mucus glycans and the development of goblet cells in the colonic epithelium of a gnotobiotic model rodent. BMC Biol. 11, 61